You can make delicious, high-protein bagels at home with just three simple main ingredients. These Cottage Cheese Protein Bagels are golden on the outside, fluffy on the inside, and pack 10 grams of protein each for a satisfying breakfast or lunch.
Table of Contents
Why You Will Love This Recipe
You will love these Cottage Cheese Protein Bagels because they are incredibly easy to make and require no yeast or advanced baking experience. By swapping traditional yogurt for protein-rich cottage cheese, you get a light and airy texture with a significant protein boost. They are perfect for meal prep, can be customized with your favorite toppings, and cook quickly in either the air fryer or the oven.
Ingredients for Cottage Cheese Protein Bagels
- 1 cup all-purpose flour (unbleached, whole wheat, or gluten-free Cup 4 Cup)
- 2 teaspoons baking powder
- Pinch of salt (optional, for enhanced flavor)
- 1 cup plus 2 tablespoons cottage cheese (4% or 2% milk fat)
- 1 large egg (whisked with a splash of water for egg wash)
- Toppings of choice (everything bagel seasoning, sesame seeds, poppy seeds, or shredded cheese)
Step-by-Step Instructions
- Prepare the Base: In a medium mixing bowl or the bowl of a stand mixer, combine the flour, baking powder, and salt. Whisk these dry ingredients together to ensure the leavening agent is evenly distributed.
- Form the Dough: Make a well in the center of the dry ingredients and add the cottage cheese. Use a rubber spatula or a fork to mix until a crumbly dough forms. Continue mixing until the dough begins to come together into a ball.
- Knead the Dough: Transfer the dough onto a well-floured surface. With floured hands, knead the dough for about 2 minutes until it becomes semi-smooth. If the dough is too sticky, add a light sprinkle of flour as you go.
- Shape the Bagels: Divide the dough into 4 equal sections. Roll each section into a log approximately 6 to 7 inches long and 3/4 inches thick. Bring the ends together and pinch them firmly to seal, forming a bagel shape.
- Add Toppings: Whisk the egg with a splash of water to create an egg wash. Brush the tops and sides of each bagel with the egg wash, then sprinkle your desired toppings over the surface.
- Cook the Bagels: To air fry, preheat your air fryer to 300°F. Line the basket with parchment paper or spray with cooking oil. Place the bagels in an even layer and cook for 15 to 17 minutes until golden brown. To bake in the oven, preheat to 375°F and bake on a parchment-lined sheet for 20 to 25 minutes.
- Cool and Serve: Remove the bagels from the heat and let them cool for at least 15 minutes. This step is essential as the bagels continue to set while cooling. Slice, toast, and enjoy!

Expert Tips for Success
To get the best results with your Cottage Cheese Protein Bagels, ensure you mix the flour and baking powder thoroughly before adding the cheese; this creates a self-rising effect that makes the bagels puff up. Kneading is another critical step, as it develops the structure needed for a smooth finish. Always use an egg wash or a light spray of olive oil to help your toppings stick and to achieve that beautiful golden-brown color. Finally, remember that air fryers vary in temperature, so start checking your bagels at the 10-minute mark to prevent over-browning.
Variations and Substitutions
If you need a gluten-free option, you can easily substitute the all-purpose flour with a high-quality gluten-free 1:1 baking blend. For those who want to save time, you can use self-rising flour and omit the baking powder and salt. You can also vary the flavors by adding shredded Asiago cheese to the top or mixing cinnamon and a touch of sweetener into the dough for a dessert-style bagel.
Serving Suggestions
These Cottage Cheese Protein Bagels are incredibly versatile. Serve them as a classic breakfast sandwich with scrambled eggs, cheese, and bacon, or keep it simple with a spread of cream cheese or extra cottage cheese topped with sliced tomatoes. They also make excellent bagel pizzas—just add sauce and mozzarella and air fry until melted. For a crunchy snack, you can even slice them thin and air fry them into homemade bagel chips.
Storage, Freezing, and Reheating
Store any leftover bagels in an airtight container in the refrigerator for up to 5 days. For longer storage, these bagels freeze beautifully for up to 3 months; just place them in a freezer-safe bag or container. When you are ready to eat, defrost them overnight in the fridge and reheat in the toaster, microwave, or the air fryer at 330°F until warmed through and crisp.
Nutrition Information
| Metric | Amount Per Serving |
| Calories | 170 kcal |
| Total Fat | 1.8g |
| Saturated Fat | 0.8g |
| Cholesterol | 7.7mg |
| Sodium | 202.2mg |
| Total Carbohydrate | 29.2g |
| Dietary Fiber | 1g |
| Sugars | 2.6g |
| Protein | 9.9g |
| Calcium | 292.3mg |
| Iron | 1.9mg |

Cottage Cheese Protein Bagels
Ingredients
Method
- Prepare the Base: In a medium mixing bowl or the bowl of a stand mixer, combine the flour, baking powder, and salt. Whisk these dry ingredients together to ensure the leavening agent is evenly distributed.1 cup all-purpose flour, 2 teaspoons baking powder, 1 pinch salt
- Form the Dough: Make a well in the center of the dry ingredients and add the cottage cheese. Use a rubber spatula or a fork to mix until a crumbly dough forms. Continue mixing until the dough begins to come together into a ball.1 cup cottage cheese
- Knead the Dough: Transfer the dough onto a well-floured surface. With floured hands, knead the dough for about 2 minutes until it becomes semi-smooth. If the dough is too sticky, add a light sprinkle of flour as you go.
- Shape the Bagels: Divide the dough into 4 equal sections. Roll each section into a log approximately 6 to 7 inches long and 3/4 inches thick. Bring the ends together and pinch them firmly to seal, forming a bagel shape.
- Add Toppings: Whisk the egg with a splash of water to create an egg wash. Brush the tops and sides of each bagel with the egg wash, then sprinkle your desired toppings over the surface.1 large egg, Toppings of choice
- Cook the Bagels: To air fry, preheat your air fryer to 300°F. Line the basket with parchment paper or spray with cooking oil. Place the bagels in an even layer and cook for 15 to 17 minutes until golden brown. To bake in the oven, preheat to 375°F and bake on a parchment-lined sheet for 20 to 25 minutes.
- Cool and Serve: Remove the bagels from the heat and let them cool for at least 15 minutes. This step is essential as the bagels continue to set while cooling. Slice, toast, and enjoy!
Notes
Frequently Asked Questions
Are Cottage Cheese Protein Bagels healthy?
Yes, these bagels are a healthy alternative to store-bought versions. They are made with wholesome ingredients and provide nearly 10 grams of protein per serving, making them a great choice for those looking to increase their protein intake while keeping calories moderate.
How much protein is in each bagel?
Each bagel contains approximately 10 to 11 grams of protein. If you use them to make a breakfast sandwich with eggs and cheese, you can easily reach 25 grams of protein for a single meal.
Can I make these bagels gluten-free?
Absolutely. You can substitute the all-purpose flour with a gluten-free flour blend like Cup 4 Cup to make these bagels safe for those with gluten sensitivities.